MedGaugeE.5 Research services Active
Bioinformatics pipelines, omics quality control and research data applications, composed from the C domain, D.5 and D.10. Graded by reproduction rate and recomputation agreement rate.
Evidence: none. No benchmark card lists this capability yet. No level is issued: methodology 0.1.0 sets no level thresholds. For scenario capabilities the state is derived from the D-domain capabilities they are composed of (the lowest among them); levels for E are issued only by signed L5 override.
- Domain
- E · Scenario
- Evidence form
- program
- Veto constraints
- —
- Depends on
- C.1 Data processingC.2 Data synthesisC.3 Data augmentationC.4 Data validationC.5 Pipeline orchestrationC.6 Deterministic program implementationC.7 Program verificationD.5 Bioinformatics QC and recomputationD.10 Research assistance
- Required by
- —
- Internal task families
- —
- External anchors
- —
- Version
- 0.1.0 · 0.1.0
Definition in detail
Research services are judged by whether results can be reproduced and recomputed. Pipelines and data applications that cannot be rerun to the same result have little value.
Inputs a task gives
- Baseline reproduction and recomputation agreement rates
- Pipeline specifications and omics data
- Workflow materials for the C-domain capabilities, D.5 and D.10
Artifact required
The component artifacts defined by the C-domain capabilities, D.5 and D.10, and a scenario run record with reproduction attempts, recomputation comparisons and indicator values before and after.
How it is graded
Graded by before-and-after scenario indicators: reproduction rate and recomputation agreement rate, computed by program from the run record against the baseline. Levels L1 to L4 are to be derived by program from verified result records once their thresholds are set; methodology 0.1.0 sets none and issues no level. L5 (role candidate) is never derived: it requires written before-and-after evidence on the scenario indicators and external anchors pointing the same way, and is granted only by a signed level override in registry/level-overrides with evidence links and the signer named.
In scope
- Bioinformatics pipelines, omics QC and research data applications
- Reproduction and recomputation agreement
Out of scope
- Scoring of each component artifact - graded under C.1 to C.7, D.5 and D.10
- Regulatory classification of a product built on the scenario - recorded in regulatory_context, not graded
Typical failures
Expected failure patterns; not measured rates.
- Reproduction that depends on undeclared environment state
- Agreement measured with looser tolerances after than before
- Pipelines that rerun but silently skip failed steps
Standards: std-medgauge-capability-framework
Benchmarks
No benchmark card lists this capability.
Grading references
No grading reference is mapped to this capability.